Missing Asteroid Mystery MitigatedThere are asteroids missing from the belt between Mars and Jupiter, and now researchers think they were shoved out of place by two of our solar system’s gas giants – Jupiter and Saturn, as they assumed their current orbit some 4 billion years ago.
1st Mar 2009 Walk like a manAs the Bee Gees sang in their seventies hit Staying Alive, there’s a lot you can tell from the way someone uses their walk. And now it seems that our ancestors may have been walking like us for at least 1.5 million years.
1st Mar 2009 Happy Birthday Seeds!A global seed bank in Svalbard celebrated its 1st birthday on the 26th of February, but rather than receiving a cake, they received a four tonne shipment of seeds from all over the world, bringing the total number of seeds stored to over 20 million.
1st Mar 2009 Wannabe octopus fugitiveIt wasn’t quite the Great Escape, but aquarium keepers at Santa Monica Pier Aquarium in the United States were left knee deep in water this week when a cheeky octopus tried to make a break for freedom.
1st Mar 2009 First Fish SexNicola Phillips and John LongNicky - Geologist John Long and his team have discovered how ancient vertebrates have sex and even how their penis functioned. This research, combined with early finds suggests that vertebrates separated into males and females in primitive fish almost four hundred million years ago. Scientists have known ancient fish had sex since their discovery of a primitive mother fish with a fossilised embryo inside it in the Gogo region John - Now looking at more of this amazing fossil fish material from the Gogo fossil sites in Australia we’ve found that the biggest group of these armoured fish placoderms – the biggest group, the arthrodires – also have embryos inside them and they were also fertilising by males copulating with the females. This is something that we would not have expected. When you look at the group that the mother fish belongs to, the ptyctadons, they actually show sexual dimorphism. The males have claspers and the females don’t. Claspers are what we see in sharks and rays today, how they copulate. The arthrodires, on the other hand, their pelvic fins up and till now have been always depicted as very simple structures just like simple fins. It may just go right back and look again, and look hard at these fossils to see if anything had been overlooked. We found it. Ben - So structures found on fossilised fish can tell us a great deal about the evolution of sexual dimorphism. That’s different characteristics for males and females and the more we understand about these ancient animals the better we understand our own evolutionary history. That was John Long from Museum Victoria. March 2009 Singing stirings - build a guitarMake beautiful music with some string and a table, and find out why some notes sound great together. What you need
What to Do
Put two blocks under each string. Add some water to the bottle. Try plucking the string. Try changing the length and the weight in the bottle and see what effect this has on the sound it produces. Set up a second string to have the same weight as the first. find out which lengths sound good together. What may HappenYou should find that making the string shorter, or the weight heavier should make the pitch higher. If you get the weights the same in both bottles and you jiggle the string a bit to make the tension in both strings the same, you should find that the two strings sound nice together when one string is 1/2, 2/3, 3/4 as long as the other. What is going on?
.A stretched string vibrates because when it is pulled in one direction the tension on each part of the string is no longer pulling in opposite directions and cancelling itself out, some of the tension will act to straighten the string. This means that the string accelerates until it straightens out. At which point it over shoots and starts to bend the other way. Eventually it starts to accelerate in the other direction. This process happens many tens or hundreds of times a second,
There are various things you can do to the string to change the rate at which it vibrates:
How do some notes sound good together?A string doesn't just vibrate in one simple way there are a whole set of different 'modes' of vibration. There is the fundamental node where the whole string moves in one direction and then the other which all the diagrams so far have shown. Then there are a series of harmonics where the string vibrates in different ways:
.The harmonics are the reason why the same note can sound so different coming from a violin and an oboe. The fundamental frequency is the same but the amount of each of the harmonics is different. This is also how we tell the difference between different vowels, an 'Aaaah' sound may be at the same pitch as an 'Eeee' sound but their harmonics will be different.
Back to the two notes again. Sounds which have harmonics of a similar pitch sound good together. For example if you have a string whose fundamental is at 100Hz it will have harmonics at 200Hz, 300Hz, etc This should sound good with any note whose harmonics overlap, so another string with a fundamental at 150Hz, it will have a first harmonic at 300Hz which is the same as the second harmonic of the other string. If the two strings have the same tension the second string would be 2/3 as long as the first. In fact any integer fraction will sound quite good, especially the ones involving small numbers. In fact if one string is 1/2 the length of the other so many of the harmonics of the long string will be a harmonic of the short string that they sound very similar and we call them the same note, just an octave apart. . Written by Dave Ansell When Science meets ComedyRobin InceRobin - Bleeding heart liberal was originally going to be a more political show than it is but it started edging more and more into things about Carl Sagan and Voyager and Ben - It sounds like a risk actually to talk about, as you said, your favourite geneticist. I’d imagine a lot of people don’t even have a favourite geneticist. Robin - I think part of the key to it is to, right from the start, lay out the fact that you are not smarter than the audience. You can sometimes look supercilious or superior whereas I am playing it very much from the angle that I’m not from a scientific background, I’ve got increasingly into science. I try and make it as silly as possible. Part of the humour is perhaps the ridiculous man jumping up and down doing nursery rhymes that were supposedly invented by Gregor Mendel. Ben - I take it from that Mendel’s your favourite geneticist? Robin - Do you know what, they’re so troublesome! You know the way that James Watson just suddenly fell out of the chart last year, whether it was justified or not? I just find I’m always fascinated by intellectual monks. Whether they’re inventing tonic wines, whether they’re noting moments where the moon has been struck by a small asteroid or whether they’re counting wrinkles in smooth peas.
Robin - In truth what I often do is I have a pretend top 3, of which I never reveal two of them, which allows me to constantly change my list without anyone realising, year by year. Ultimately it is probably Carl Sagan, just because Carl Sagan’s my favourite scientist. I know that many people would say that his level of scientific achievement in terms of discovering a new theory or whatever it may be is not great but his zeal, his passion, the fact that he brought so many people onto science, reading his books which combine magnificent poetry with hard facts. I find I’m quite obsessed by him. Eratosthenes, I’ve been trying for five years to write a routine about Eratosthenes, the man who first got an approximate idea of what the circumference of the Earth was through shadows, sticks and wells. I still haven’t found it. Maybe when I come to Cambridge or Norwich I shall attempt another making Eratosthenes funny routine. Ben - Science inspires you, how are your audiences responding? Robin - Every now and again there are some people who are a little bit confused. I was doing a gig in Bromsgrove. Because I was just sitting, waiting outside the stage door I just heard a couple go past go: “well to be quite honest I didn’t quite understand quite a lot of that.” It’s a starting point hopefully. What I’ve found that is lovely is finding that people have gone out and bought books by Richard Feynman and books by Ben - This year is also an anniversary of two hundred years since Charles Darwin was born and 150 years since the Origin of the Species was published. How does Darwin fit in your show? Robin - I think the first time I became truly fascinated was reading an essay by Jacob Brunowski where he talks about, if you drove past down on the 3rd day of the 3rd year you’d have seen a young man playing a bassoon to a flower. It was Darwin making his son playing a bassoon to see how it affected flowers. I thought this is an interesting man. Obviously I also am a reasonably big fan of the theory of evolution. It seems like a pretty good theory to come up with. The show does end up on about 15-20 minutes about Charles Darwin, about having 20 years locked in your head – having this amazing theory - and then I can’t resist a little bit about the woolly-headed nature of creationism.
Robin - No I don’t think a lot of it will make it into his new show which is titled ‘Science.’ There is a huge and accidental rational movement basically. I think after we put together the show ‘Nine Lessons and Carols for Godless People’ where we, on the science side you have Simon Singh and Ben Goldacre and Richard Dawkins and various musicians – people like Jarvis Cocker and Darren Hayman. And then comedians and all of them were doing something on the rational world. You have people like Dara O’Brian, Chris Allison, Stewart Lee and Josie Long. All of them are approaching things from a rational perspective, especially Dara who has a physics background. He’s very excited about talking about science. I think the reason is perhaps because TV isn’t really pandering very much to intellectual programming. I hate – that’s a terrible thing to say but knowledge, learning and anything like that. There has been an accidental rational/scientific movement to start in comedy. March 2009 Addicted to LaughterProfessor Sophie Scott, Institute of Cognitive Neuroscience, UCLHelen - Professor Sophie Scott from University College London has looked into finding out what’s going on in our brains when we see other people laugh. Hello Sophie. Thanks for joining us on the show today. What’s going on inside our brains when we hear other people laughing?
Helen - So basically your brain is getting ready to smile, even if you’re not at that point of smiling. Do we know if that’s what’s going on really? Sophie - That’s what going on. There are people who aren’t smiling, they’re not laughing but they’re just listening to the sounds. They’re told not to move or to do anything. Nonetheless even though they’re being told not to engage with these sounds at all their brain is gearing up much more when they hear the laughter. We’re interpreting that as the precursor of people actually starting to smile. Helen - How are we finding this out? How are you looking inside people’s brains and finding out what’s going on when they’re hearing different sounds or other people? Sophie - We’re using a technique called functional magnetic resonance imaging which is a way of taking photographs of activity inside people’s brains when they’re, for example, listening to different sounds or they’re doing different things. Helen - Why do you think this might be? What are the ideas behind it? Why should we want to mimic laughter?
Helen - I wonder if we would start smiling if we hear chimpanzees laughing. Sophie - You would do. It sounds very much like a human laugh. You can hear that it’s not human, it’s different. It’s definitely a laugh. Helen - Babies make laughing sounds too don’t they. Do we know that’s a similar reason why gurgling, happy sounds come out of us when we’re still very tiny? Sophie - I think that’s a very good point. It does seem to be one of the first kinds of behaviours that really emerges. Children often cry from the moment they’re born but babies start to smile and laugh around six weeks. That seems to be a really important function for establishing close bonds with their care givers. Parents are always absolutely thrilled when their baby starts smiling and laughing back at them. Then they’ll really go miles to try to get the baby to laugh. It’s got this really strong positive bonding quality. Helen - Presumably we do feel good when we laugh. Is that part of it as well? Are there hormones that are making us feel happy when we laugh?
Helen - We think that maybe we’ve been laughing longer than we’ve been talking. Is that right? Sophie - There are some people who’ve argued that because you find laughter in other primate groups and some people have argued in other mammals. Laughter would be one reason for us to get together and have social bonds form between us even before we talked to each other. It’s something we could do as a group of people before we could even necessarily have words. Helen - I like the idea of wordless Stone Age jokes, wonderful! There are different types of laughter, aren’t there? We think about laughter just being something to do with a joke or something that’s funny. We laugh when we’re nervous or perhaps as cruel laughter as well. Do you think the brain‘s going to respond differently to different types of laughter? Sophie - I think this is almost certainly going to be the case. I’m just looking at one type of laughter. We were taking quite genuine sounding laughs that didn’t have any particular quality to them. There weren’t any evil laughs or nervous laughs. When you consider that people actually laugh in lots of different ways. If you ask what makes people laugh they will tell you different things. In Germany people will give you a different answer than people would here. That’s associated with different qualities of laugh that people in different cultures are better attuned at hearing. I think there’s undoubtedly a whole story within this of different kinds of laughter and different ways that we use it. Helen - Is it all about the sound of laughter or if we look at someone else or see someone else laughing. Is that going to give us a similar response in our brains? Sophie - I think so. You must have had the experience of sitting in a meeting and you can see in your peripheral vision that one of your colleagues has started giggling and they’re not making any noise yet but they’re shaking in the way they’re laughing. It starts to have that effect on you. I think it’s something that’s not bound to be expressed in the auditory modality. Helen - Sometimes people make nasty sounds: screaming and retching. You said there wasn’t such a strong response. We’re not pulling a face as much or preparing ourselves to pull a face when that happens. Sophie - There was a degree of an effect there but it was a much less strong effect than the negative effects we looked at. It did seem that there’s a little bit of understanding emotions made by other people seems to be that you engage motor areas – these areas you’d use to make actions yourself. They’re much less strong than they are for these positive emotions like laughter. It can’t be something to do with the contagion of emotion itself because we know that disgust is really contagious. If you’re with somebody who looks at the bowl of food and goes ‘ergh’ you’re going to feel a little bit sick. You’ll probably not want to eat that food yourself. It’s very contagious but it doesn’t seem that when they go ‘blergh’ you have to start going ‘blergh’ as well. Helen - Just as well to hear them! Where are you going to take this next? Are you going to start planning to look at more detail at what is going on inside our brains when we’re preparing to laugh and smile? Sophie - There’s all sorts of things we’re trying to do with this. One of my colleagues who’s been working on this since I started has been off looking at laughter in other cultures. She’s been off working with people living in very un-westernised societies in the Namibian Desert. Lo and behold they actually laugh in the same way. It is interesting to look at the really strong commonalities across groups. It’s also interesting to start looking at these things in terms of understanding normal and abnormal brain function. Can we find some of these patterns of these responses to very positive emotional noises; are they reduced in any particular clinical groups? People who really aren’t finding life very funny, are they showing depresses responses? March 2009 Profile of a ComedienneKatherine Ryan, Steve JonesMeera - At the end of January Channel 4 and the Wellcome Trust launched an 8-part online miniseries called ‘Routes’ which saw award-winning comedienne, Katherine Ryan, send a sample of her saliva to a lab in a bid to help her understand what’s hidden in her genes.
Meera - Before you did it how did you feel about having your DNA sequenced? Were you nervous? Katherine - I was always open to the idea of – I’m not afraid of information. I think that it can only help you. I really was interested to know the result. Meera - You already knew a little bit about your genetics before you did this, didn’t you? Katherine - Yeah, I’ve had some bad news already, I guess. I had a melanoma two years ago that was a little bit advanced. I had to have a few surgeries to get rid of that. That’s a particularly aggressive form of skin cancer and there are different genes they can test, different markers that might say you’d have a higher probability of getting cancer than someone else. It was just something that I’d love to do to see what else is in there and I’m having a baby this year. I really wanted to see what I might be a carrier of. Meera - What did you find out? Katherine - Funny things. I found out that I’m not resistant to malaria or the norovirus. I’m not resistant to AIDS, which is weird. I didn’t know anybody was resistant to AIDS! I learned that lupus is closely related to celiac disease which runs in my family. They’re both autoimmune disorders. I have a prostate cancer gene but I don’t have a prostate gland so I’m okay. I don’t have schizophrenia or Parkinson’s or cystic fibrosis carrier traits. Some good news and bad news all mixed in there. It’s a huge profile that you get back. Some of the information was that my eyes are blue, I knew that. I’m very white. I think that some of my ancestry comes from Ireland and nowhere else. It was all very interesting. I add research to it all the time. They compare your results to people with the same background and there’s always something new to learn. Meera - That was comedienne Katherine Ryan discussing her experience of having her genome profiled. How is this profile actually done and how relevant is the information that it provides us with? I met up with Steve Jones, Head of Genetics at University College London to find out, starting with why spit is such a good sample to use. Steve - To start with it’s not really spit. Spit is just an organic liquid. More important is what cells float in it. Cells are what your body is made out of. There are trillions and trillions of cells. That will contain enough cells for them to take off to the lab, take DNA out of it and do this magical sequencing. Meera - Once a sample has been sent off what actually happens to get a sequence of someone’s DNA? Steve - It’s quite a complicated business. There’s a whole variety of methods of actually doing it. One way is to basically take a set of molecular scissors which snip, at a particular point, 3 letter sequences. You snip all the way along the DNA into tiny little fragments often overlapping with each other. You look for the overlaps and then rebuild up the whole sequence. That’s how you do a DNA sequence. I think what this young lady had done probably wasn’t quite a sequence, it was looking at individual points in the DNA to see whether they varied compared to the population as a whole. Meera - What does looking at particular points or markers in someone’s DNA, what can that tell you about someone?
Meera - once someone has their genome sequenced in this way what is the result of this sequencing that they see? Steve - What you can produce is what’s called the haplotype which is just a statement of what your identity at particular points of the DNA is. If she’s interested in health there are particular genes which predispose to certain diseases. Some are well-known diseases like cystic fibrosis which she’d probably know already if she had but it could possibly tell you that maybe, for example, in order to get lung cancer you need to smoke. You need to have one rather common genetic variant. There was once a hope that you could screen lots and lots of people and tell them I’m afraid you’ve got the gene that if you smoke you will almost certainly get lung cancer. The hope was it would stop people smoking. It doesn’t. Meera - Some people worry about genome sequencing because they are concerned about finding out what diseases or disorders they might get. Surely it’s not just your genetics. Environment also plays an important role, doesn’t it? Steve - There are occasional rare genetic diseases, things like cystic fibrosis that if you’ve got them really obviously it’s the gene that makes a big difference. The environment doesn’t make all that much difference. There are many more like heart disease. If you have particular genes it is particularly important for you to avoid a fatty diet, not to get overweight, not to smoke and that kind of stuff. I don’t deny this is true. This is certainly true. That’s true for everybody. Meera - Geneticist Steve Jones explaining how Katherine’s sample would have been analysed to provide her with her profile of susceptibility and resistance to certain genetic disorders. To find out more about Katherine’s experience or play the range of interactive games that Channel 4 have developed to explain the world of genetics visit the roots website at www.routesgame.com. March 2009 Geek Pop - Science and Music Collide OnlineVicky West, Geek PopBen - Geekpop is an online music festival dedicated to music about, or inspired by science. To give you an idea of the sort of music we’re talking about here’s a sample of the song ‘nanobot’ by ‘A Latin Punk Circle.’ ALatinPunkCircle - Nanobot Ben - Hi Vicky, thanks for joining us.
Ben - Geekpop is a fantastic idea. How did you come up with this? Vicky - It was a bit of a pet project really. Me and a couple of fellow geeks were doing a post grad course in science communication which is very serious and all about expelling the myths of scientists being these labcoat-wearing, bespectacled people. We just thought, it’s not all about this. Sometimes there are geeks who are quite happy to be geeks and have a bit of fun with it as well. We threw it open on our Facebook group just to come up with some science-related pop music. We had the usual suspects: Atomic Kitten – fairly tenuous links. It just kind of snowballed from there. We started getting contacts from lots of bands who were either working in science or were writing about scientific matters. They were asking to get involved and whether there’d be a platform to share their music. That’s how the GeekPop festival came about, really. Ben - As you said, it’s an online music festival. When I think of music festivals I think of very large, muddy fields. I think of knackered tents, big stages, loud bands. How does this work online? Vicky - It’s basically, if you imagine your favourite festival, in the comfort of your own home or car or wherever you listen to your mp3 player. We’ve got 4 different tents. There’s the tetrahedron, (other shapes are available), the reproductive stage, the tesla tent and the experimental stage as well: much like many of the big commercial festivals. There are lots of different styles of music at each tent. You obviously don’t have to pay. It’s free-of-charge. We ask people to get online – geekpop.co.uk – and download it to your mp3 player. Then you can have this virtual festival experience whenever or wherever you like.
Vicky - Indeed. Memories aren’t always the most reliable at festivals, are they? I don’t know what your experiences are like, Ben. It’s pretty much that. Although it feels like a live experience you can revisit it any time you like. If there’s a particular band you’re into. We also have some exclusive green room areas as well. If you want to find out more about a band or the science behind a song we have lots of interview about those bands. There’s some online content as well. You can literally pick it up and put it down as you wish. It’s an annual event. Last year’s turned into a much bigger event than we ever anticipated. We’ve got big hopes for this year’s event as well which kicks off on the 6th March, which happens to be our national Science and Engineering week as well. Purely coincidental. It’ll be up there for some time so you can pitch in at any time you like. Ben - That’s good to hear. The last clip of the song we heard was clearly and very obviously a song written about a scientific topic. I’ve been sent a sample by a band called The Standard which seems to be rather less directly scientific but more inspired by something. Let’s have a play at that. The Standards - 11 Dimensions Ben - That is a tiny bit tenuous. Have you had to turn anyone away? Has someone turned up and said – ‘I’ve got this song, it’s all about science I’d like you to publicise it for me on the net,’ and you’ve had to say, ‘well, I’m sorry but that’s just misleading science?’
Ben - Where do we have to go online to listen? Vicky - You can head to Geekpop.co.uk. As of March 6th the brand new festival will be up there. At the moment you’ve still got an opportunity to listen to last year’s festival. You can also join us – we’ve got a Facebook group which is very popular. Just look for Geekpop. We also have Twitter as well. If you’re into Twittering you can join along. The week before the festival things are getting very hyper and lots of Twitter activity going on there. We’ve also, being a festival we do have a lost and found facility as well, albeit a virtual one. We’re appealing for people at the moment to get involved to anticipate things they might lose and indeed find at a festival. If you want to take part ahead of the release day then do get in touch either by Facebook or the website. March 2009
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