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There is obviously a connection between considering arbitrary variation in path taken by a system and just a single variation in some element of position taken by an object at some fixed time during the path. This was illustrated well in your post about numerical techniques for solving variational problems.
There is obviously a connection between considering arbitrary variation in path taken by a system and just a single variation in some element of position taken by an object at some fixed time during the path.
typing error
However, for a multi-particle system, getting from here to your version of the equation, which you call the Energy-Position equation is non-trivial. It requires a change of variables for the derivatives.